Analysis of interatomic Contacts of Structural Units in PDB entry:
5TZ1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5TZ1 entry

There are 2 chains in PDB entry 5TZ1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 45PHE 528
B
 LYS 45PHE 528
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 46 helices in PDB entry 5TZ1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
60 67Right-handed alpha
Helix 2
AA2
A
67 80Right-handed alpha
Helix 3
AA3
A
97 106Right-handed alpha
Helix 4
AA4
A
114 127Right-handed alpha
Helix 5
AA5
A
135 148Right-handed alpha
Helix 6
AA6
A
151 173Right-handed alpha
Helix 7
AA7
A
188 206Right-handed alpha
Helix 8
AA8
A
206 213Right-handed alpha
Helix 9
AA9
A
214 226Right-handed alpha
Helix 10
AB1
A
227 229Right-handed 310
Helix 11
AB2
A
230 235Right-handed alpha
Helix 12
AB3
A
240 267Right-handed alpha
Helix 13
AB4
A
275 283Right-handed alpha
Helix 14
AB5
A
293 326Right-handed alpha
Helix 15
AB6
A
326 345Right-handed alpha
Helix 16
AB7
A
347 351Right-handed 310
Helix 17
AB8
A
352 357Right-handed alpha
Helix 18
AB9
A
359 373Right-handed alpha
Helix 19
AC1
A
405 411Right-handed alpha
Helix 20
AC2
A
423 428Right-handed 310
Helix 21
AC3
A
429 435Right-handed alpha
Helix 22
AC4
A
465 469Right-handed 310
Helix 23
AC5
A
472 490Right-handed alpha
Helix 24
AC6
B
60 65Right-handed alpha
Helix 25
AC7
B
67 80Right-handed alpha
Helix 26
AC8
B
96 106Right-handed alpha
Helix 27
AC9
B
114 127Right-handed alpha
Helix 28
AD1
B
130 134Right-handed 310
Helix 29
AD2
B
135 148Right-handed alpha
Helix 30
AD3
B
151 173Right-handed alpha
Helix 31
AD4
B
188 206Right-handed alpha
Helix 32
AD5
B
206 212Right-handed alpha
Helix 33
AD6
B
216 227Right-handed alpha
Helix 34
AD7
B
228 234Right-handed 310
Helix 35
AD8
B
240 266Right-handed alpha
Helix 36
AD9
B
275 283Right-handed alpha
Helix 37
AE1
B
293 326Right-handed alpha
Helix 38
AE2
B
326 345Right-handed alpha
Helix 39
AE3
B
347 351Right-handed 310
Helix 40
AE4
B
352 357Right-handed alpha
Helix 41
AE5
B
359 373Right-handed alpha
Helix 42
AE6
B
405 411Right-handed alpha
Helix 43
AE7
B
423 428Right-handed 310
Helix 44
AE8
B
429 436Right-handed alpha
Helix 45
AE9
B
465 469Right-handed 310
Helix 46
AF1
B
472 490Right-handed alpha
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There are 10 sheets in PDB entry 5TZ1. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
82 87first strand
Strand 2
A
90 95anti-parallel
Strand 3
A
401 404parallel
Strand 4
A
379 383anti-parallel
Strand 5
A
112 113anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
183 187first strand
Strand 2
A
517 522anti-parallel
Strand 3
A
491 494anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
387 388first strand
Strand 2
A
395 396anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
444 446first strand
Strand 2
A
451 453anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
503 504first strand
Strand 2
A
511 512anti-parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
50 52first strand
Strand 2
B
82 87parallel
Strand 3
B
90 95anti-parallel
Strand 4
B
401 404parallel
Strand 5
B
379 383anti-parallel
Strand 6
B
112 113anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
183 187first strand
Strand 2
B
517 522anti-parallel
Strand 3
B
491 494anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
387 388first strand
Strand 2
B
395 396anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
444 446first strand
Strand 2
B
451 453anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
503 504first strand
Strand 2
B
511 512anti-parallel
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