Analysis of interatomic Contacts of Structural Units in PDB entry:
5U70


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5U70 entry

There is 1 chain in PDB entry 5U70 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 69ALA 1171
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 42 helices in PDB entry 5U70. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
75 85Right-handed alpha
Helix 2
AA2
A
88 116Right-handed alpha
Helix 3
AA3
A
143 148Right-handed alpha
Helix 4
AA4
A
152 177Right-handed alpha
Helix 5
AA5
A
182 187Right-handed alpha
Helix 6
AA6
A
188 207Right-handed alpha
Helix 7
AA7
A
208 212Right-handed 310
Helix 8
AA8
A
216 218Right-handed 310
Helix 9
AA9
A
219 233Right-handed alpha
Helix 10
AB1
A
234 236Right-handed 310
Helix 11
AB2
A
241 272Right-handed alpha
Helix 12
AB3
A
279 292Right-handed alpha
Helix 13
AB4
A
303 338Right-handed alpha
Helix 14
AB5
A
343 350Right-handed alpha
Helix 15
AB6
A
361 373Right-handed alpha
Helix 16
AB7
A
392 401Right-handed alpha
Helix 17
AB8
A
401 407Right-handed alpha
Helix 18
AB9
A
417 425Right-handed alpha
Helix 19
AC1
A
442 461Right-handed alpha
Helix 20
AC2
A
472 480Right-handed 310
Helix 21
AC3
A
488 502Right-handed alpha
Helix 22
AC4
A
504 514Right-handed alpha
Helix 23
AC5
A
526 537Right-handed alpha
Helix 24
AC6
A
558 570Right-handed alpha
Helix 25
AC7
A
613 618Right-handed alpha
Helix 26
AC8
A
748 753Right-handed alpha
Helix 27
AC9
A
787 795Right-handed alpha
Helix 28
AD1
A
816 824Right-handed alpha
Helix 29
AD2
A
838 846Right-handed alpha
Helix 30
AD3
A
858 863Right-handed alpha
Helix 31
AD4
A
872 885Right-handed alpha
Helix 32
AD5
A
896 903Right-handed 310
Helix 33
AD6
A
909 926Right-handed alpha
Helix 34
AD7
A
930 933Right-handed 310
Helix 35
AD8
A
934 939Right-handed alpha
Helix 36
AD9
A
946 948Right-handed 310
Helix 37
AE1
A
949 955Right-handed alpha
Helix 38
AE2
A
960 970Right-handed alpha
Helix 39
AE3
A
988 992Right-handed 310
Helix 40
AE4
A
994 1007Right-handed alpha
Helix 41
AE5
A
1099 1109Right-handed alpha
Helix 42
AE6
A
1110 1127Right-handed alpha
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There are 4 sheets in PDB entry 5U70. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
408 412first strand
Strand 2
A
383 387parallel
Strand 3
A
353 356parallel
Strand 4
A
431 434parallel
Strand 5
A
466 470parallel
Strand 6
A
484 487parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
539 543first strand
Strand 2
A
600 605anti-parallel
Strand 3
A
573 578anti-parallel
Strand 4
A
585 587anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
829 832first strand
Strand 2
A
807 811parallel
Strand 3
A
776 780parallel
Strand 4
A
852 855parallel
Strand 5
A
889 894parallel
Strand 6
A
942 944parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
979 984first strand
Strand 2
A
1161 1166anti-parallel
Strand 3
A
1009 1017anti-parallel
Strand 4
A
1143 1148anti-parallel
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