Analysis of interatomic Contacts of Structural Units in PDB entry:
5WQA


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5WQA entry

There are 2 chains in PDB entry 5WQA (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 79GLN 412
B
 ILE 79GLN 412
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 44 helices in PDB entry 5WQA. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
86 96Right-handed alpha
Helix 2
AA2
A
97 99Right-handed 310
Helix 3
AA3
A
105 113Right-handed alpha
Helix 4
AA4
A
116 129Right-handed alpha
Helix 5
AA5
A
130 135Right-handed alpha
Helix 6
AA6
A
138 152Right-handed alpha
Helix 7
AA7
A
161 177Right-handed alpha
Helix 8
AA8
A
178 182Right-handed 310
Helix 9
AA9
A
186 200Right-handed alpha
Helix 10
AB1
A
208 215Right-handed alpha
Helix 11
AB2
A
217 224Right-handed alpha
Helix 12
AB3
A
227 240Right-handed alpha
Helix 13
AB4
A
241 243Right-handed 310
Helix 14
AB5
A
253 270Right-handed alpha
Helix 15
AB6
A
271 274Right-handed 310
Helix 16
AB7
A
275 289Right-handed alpha
Helix 17
AB8
A
302 319Right-handed alpha
Helix 18
AB9
A
320 324Right-handed 310
Helix 19
AC1
A
325 350Right-handed alpha
Helix 20
AC2
A
364 376Right-handed alpha
Helix 21
AC3
A
376 388Right-handed alpha
Helix 22
AC4
A
392 410Right-handed alpha
Helix 23
AC5
B
87 97Right-handed alpha
Helix 24
AC6
B
105 113Right-handed alpha
Helix 25
AC7
B
116 130Right-handed alpha
Helix 26
AC8
B
130 135Right-handed alpha
Helix 27
AC9
B
138 152Right-handed alpha
Helix 28
AD1
B
161 177Right-handed alpha
Helix 29
AD2
B
178 182Right-handed 310
Helix 30
AD3
B
186 200Right-handed alpha
Helix 31
AD4
B
208 215Right-handed alpha
Helix 32
AD5
B
217 224Right-handed alpha
Helix 33
AD6
B
227 240Right-handed alpha
Helix 34
AD7
B
241 243Right-handed 310
Helix 35
AD8
B
253 270Right-handed alpha
Helix 36
AD9
B
271 274Right-handed 310
Helix 37
AE1
B
275 289Right-handed alpha
Helix 38
AE2
B
302 319Right-handed alpha
Helix 39
AE3
B
320 324Right-handed 310
Helix 40
AE4
B
325 350Right-handed alpha
Helix 41
AE5
B
359 363Right-handed 310
Helix 42
AE6
B
364 376Right-handed alpha
Helix 43
AE7
B
376 388Right-handed alpha
Helix 44
AE8
B
392 409Right-handed alpha
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There are no sheets in PDB entry 5WQA
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