Analysis of interatomic Contacts of Structural Units in PDB entry:
5X8U


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5X8U entry

There are 2 chains in PDB entry 5X8U (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TYR 264SER 507
B
 LYS 688GLU 696
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 5X8U. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
266 284Right-handed alpha
Helix 2
AA2
A
288 295Right-handed alpha
Helix 3
AA3
A
301 310Right-handed alpha
Helix 4
AA4
A
312 337Right-handed alpha
Helix 5
AA5
A
338 344Right-handed alpha
Helix 6
AA6
A
345 365Right-handed alpha
Helix 7
AA7
A
384 392Right-handed 310
Helix 8
AA8
A
393 410Right-handed alpha
Helix 9
AA9
A
413 426Right-handed alpha
Helix 10
AB1
A
435 457Right-handed alpha
Helix 11
AB2
A
459 466Right-handed 310
Helix 12
AB3
A
470 490Right-handed alpha
Helix 13
AB4
A
490 498Right-handed alpha
Helix 14
AB5
A
499 507Right-handed alpha
Helix 15
AB6
B
689 696Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 5X8U.

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
369 370first strand
Strand 2
A
375 378anti-parallel
Strand 3
A
381 383anti-parallel
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