Analysis of interatomic Contacts of Structural Units in PDB entry:
6F0K

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6F0K entry

There are 7 chains in PDB entry 6F0K (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	PHE 5	TYR 211
B	ARG 75	GLN 1035
C	VAL 18	PHE 462
D	ILE 23	VAL 193
E	ILE 28	GLU 209
F	ARG 35	LEU 416
H	TYR 25	GLN 180

There are 84 helices in PDB entry 6F0K. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	8	10	Right-handed 310
Helix 2	AA1	A	11	29	Right-handed alpha
Helix 3	AA2	A	49	56	Right-handed alpha
Helix 4	AA3	A	79	86	Right-handed alpha
Helix 5	AA4	A	97	104	Right-handed alpha
Helix 6	AA5	A	124	130	Right-handed alpha
Helix 7	AA6	A	134	139	Right-handed alpha
Helix 8	AA7	A	155	165	Right-handed alpha
Helix 9	AA8	A	187	198	Right-handed alpha
Helix 10	AA9	B	138	149	Right-handed alpha
Helix 11	AB1	B	166	178	Right-handed alpha
Helix 12	AB2	B	194	207	Right-handed alpha
Helix 13	AB3	B	225	230	Right-handed alpha
Helix 14	AB4	B	263	275	Right-handed alpha
Helix 15	AB5	B	294	298	Right-handed 310
Helix 16	AB6	B	310	321	Right-handed alpha
Helix 17	AB7	B	337	350	Right-handed alpha
Helix 18	AB8	B	364	377	Right-handed alpha
Helix 19	AB9	B	395	409	Right-handed alpha
Helix 20	AC1	B	432	438	Right-handed alpha
Helix 21	AC2	B	496	503	Right-handed alpha
Helix 22	AC3	B	511	522	Right-handed alpha
Helix 23	AC4	B	528	540	Right-handed alpha
Helix 24	AC5	B	588	593	Right-handed alpha
Helix 25	AC6	B	611	617	Right-handed alpha
Helix 26	AC7	B	746	753	Right-handed alpha
Helix 27	AC8	B	785	790	Right-handed alpha
Helix 28	AC9	B	812	821	Right-handed alpha
Helix 29	AD1	B	827	832	Right-handed alpha
Helix 30	AD2	B	871	877	Right-handed alpha
Helix 31	AD3	B	902	906	Right-handed alpha
Helix 32	AD4	B	926	930	Right-handed 310
Helix 33	AD5	B	950	963	Right-handed alpha
Helix 34	AD6	B	974	980	Right-handed alpha
Helix 35	AD7	B	995	1002	Right-handed alpha
Helix 36	AD8	C	27	37	Right-handed alpha
Helix 37	AD9	C	43	68	Right-handed alpha
Helix 38	AE1	C	83	95	Right-handed alpha
Helix 39	AE2	C	96	109	Right-handed alpha
Helix 40	AE3	C	118	139	Right-handed alpha
Helix 41	AE4	C	164	187	Right-handed alpha
Helix 42	AE5	C	189	201	Right-handed alpha
Helix 43	AE6	C	222	255	Right-handed alpha
Helix 44	AE7	C	267	289	Right-handed alpha
Helix 45	AE8	C	301	331	Right-handed alpha
Helix 46	AE9	C	337	347	Right-handed alpha
Helix 47	AF1	C	351	368	Right-handed alpha
Helix 48	AF2	C	377	401	Right-handed alpha
Helix 49	AF3	C	420	442	Right-handed alpha
Helix 50	AF4	C	448	453	Right-handed alpha
Helix 51	AF5	D	34	46	Right-handed alpha
Helix 52	AF6	D	75	96	Right-handed alpha
Helix 53	AF7	D	114	121	Right-handed alpha
Helix 54	AF8	D	121	137	Right-handed alpha
Helix 55	AF9	D	175	184	Right-handed alpha
Helix 56	AG1	E	77	82	Right-handed alpha
Helix 57	AG2	E	99	110	Right-handed alpha
Helix 58	AG3	E	151	159	Right-handed alpha
Helix 59	AG4	E	174	190	Right-handed alpha
Helix 60	AG5	E	202	207	Right-handed alpha
Helix 61	AG6	F	37	51	Right-handed alpha
Helix 62	AG7	F	51	56	Right-handed alpha
Helix 63	AG8	F	60	90	Right-handed alpha
Helix 64	AG9	F	99	107	Right-handed alpha
Helix 65	AH1	F	107	115	Right-handed alpha
Helix 66	AH2	F	116	127	Right-handed alpha
Helix 67	AH3	F	155	164	Right-handed alpha
Helix 68	AH4	F	165	167	Right-handed 310
Helix 69	AH5	F	168	181	Right-handed alpha
Helix 70	AH6	F	181	185	Right-handed alpha
Helix 71	AH7	F	192	219	Right-handed alpha
Helix 72	AH8	F	230	253	Right-handed alpha
Helix 73	AH9	F	264	296	Right-handed alpha
Helix 74	AI1	F	301	309	Right-handed alpha
Helix 75	AI2	F	313	325	Right-handed alpha
Helix 76	AI3	F	325	332	Right-handed alpha
Helix 77	AI4	F	340	360	Right-handed alpha
Helix 78	AI5	F	376	400	Right-handed alpha
Helix 79	AI6	F	410	415	Right-handed alpha
Helix 80	AI7	H	32	61	Right-handed alpha
Helix 81	AI8	H	68	97	Right-handed alpha
Helix 82	AI9	H	104	135	Right-handed alpha
Helix 83	AJ1	H	157	167	Right-handed alpha
Helix 84	AJ2	H	173	179	Right-handed 310

There are 11 sheets in PDB entry 6F0K. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	102	105	first strand
Strand 2	B	108	111	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	113	114	first strand
Strand 2	B	124	125	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	158	159	first strand
Strand 2	B	458	461	anti-parallel
Strand 3	B	442	446	parallel
Strand 4	B	415	417	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	237	238	first strand
Strand 2	B	385	386	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	248	249	first strand
Strand 2	B	355	356	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	471	473	first strand
Strand 2	B	479	481	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	574	575	first strand
Strand 2	B	659	660	parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	844	845	first strand
Strand 2	B	859	860	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	882	883	first strand
Strand 2	B	891	892	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	913	914	first strand
Strand 2	B	943	944	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	52	54	first strand
Strand 2	D	164	166	anti-parallel
Strand 3	D	26	28	anti-parallel
Strand 4	D	190	192	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6F0K

Analysis of interatomic Contacts of Structural Units in PDB entry:
6F0K