Analysis of interatomic Contacts of Structural Units in PDB entry:
7CEI


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7CEI entry

There are 2 chains in PDB entry 7CEI (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLY 87
B
 ARG 447HIS 573
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 9 helices in PDB entry 7CEI. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
H1A
A
12 26Right-handed 310
Helix 2
H2A
A
34 45Right-handed 310
Helix 3
H3A
A
52 55Right-handed 310
Helix 4
H4A
A
65 77Right-handed 310
Helix 5
H1B
B
478 484Right-handed 310
Helix 6
H2B
B
492 505Right-handed 310
Helix 7
H3B
B
507 512Right-handed 310
Helix 8
H4B
B
515 522Right-handed 310
Helix 9
H5B
B
566 571Right-handed 310
Back to top of page

There are 5 sheets in PDB entry 7CEI. Click on sheet of interest to get list of strands forming it: SA, SB, SC, SD, SE,

There are 1 strands in SA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
451 452first strand
Back to list of sheets
Back to top of page

There are 1 strands in SB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
474 475first strand
Back to list of sheets
Back to top of page

There are 1 strands in SC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
488 489first strand
Back to list of sheets
Back to top of page

There are 1 strands in SD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
542 545first strand
Back to list of sheets
Back to top of page

There are 1 strands in SE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
561 564first strand
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il