Analysis of Ligand-Protein Contacts in PDB entry:
1M5R


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 12 ligands in PDB entry 1M5R. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
3DR
C
7 111',2'-DIDEOXYRIBOFURANOSE-5'-PHOSPHATE
lig 2
3DR
D
7 111',2'-DIDEOXYRIBOFURANOSE-5'-PHOSPHATE
lig 3
UDP
A
400 25URIDINE-5'-DIPHOSPHATE
lig 4
TRS
A
500 82-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
lig 5
TRS
A
501 82-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
lig 6
MPD
A
502 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 7
UDP
B
401 25URIDINE-5'-DIPHOSPHATE
lig 8
TRS
B
501 82-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
lig 9
TRS
B
502 82-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
lig 10
TRS
B
503 82-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
lig 11
MPD
B
504 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 12
MPD
B
505 8(4S)-2-METHYL-2,4-PENTANEDIOL