Analysis of Ligand-Protein Contacts in PDB entry:
1NUE


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 8 ligands in PDB entry 1NUE. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
MG
A
161 1MAGNESIUM ION
lig 2
GDP
A
160 28GUANOSINE-5'-DIPHOSPHATE
lig 3
GDP
B
160 28GUANOSINE-5'-DIPHOSPHATE
lig 4
MG
C
161 1MAGNESIUM ION
lig 5
GDP
C
160 28GUANOSINE-5'-DIPHOSPHATE
lig 6
GDP
D
160 28GUANOSINE-5'-DIPHOSPHATE
lig 7
GDP
E
160 28GUANOSINE-5'-DIPHOSPHATE
lig 8
GDP
F
160 28GUANOSINE-5'-DIPHOSPHATE