Analysis of Ligand-Protein Contacts in PDB entry:
1TTT


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 54 ligands in PDB entry 1TTT. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
2MG
D
10 242N-METHYLGUANOSINE-5'-MONOPHOSPHATE
lig 2
H2U
D
16 205,6-DIHYDROURIDINE-5'-MONOPHOSPHATE
lig 3
H2U
D
17 205,6-DIHYDROURIDINE-5'-MONOPHOSPHATE
lig 4
M2G
D
26 25N2-DIMETHYLGUANOSINE-5'-MONOPHOSPHATE
lig 5
OMC
D
32 21O2'-METHYLYCYTIDINE-5'-MONOPHOSPHATE
lig 6
OMG
D
34 24O2'-METHYLGUANOSINE-5'-MONOPHOSPHATE
lig 7
YYG
D
37 39 BUTYRIC ACID METHYL ESTER
lig 8
PSU
D
39 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 9
5MC
D
40 215-METHYLCYTIDINE-5'-MONOPHOSPHATE
lig 10
7MG
D
46 247N-METHYL-8-HYDROGUANOSINE-5'-MONOPHOSPHAT
lig 11
5MC
D
49 215-METHYLCYTIDINE-5'-MONOPHOSPHATE
lig 12
5MU
D
54 215-METHYLURIDINE 5'-MONOPHOSPHATE
lig 13
PSU
D
55 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 14
1MA
D
58 236-HYDRO-1-METHYLADENOSINE-5'-MONOPHOSPHATE
lig 15
2MG
E
10 242N-METHYLGUANOSINE-5'-MONOPHOSPHATE
lig 16
H2U
E
16 205,6-DIHYDROURIDINE-5'-MONOPHOSPHATE
lig 17
H2U
E
17 205,6-DIHYDROURIDINE-5'-MONOPHOSPHATE
lig 18
M2G
E
26 25N2-DIMETHYLGUANOSINE-5'-MONOPHOSPHATE
lig 19
OMC
E
32 21O2'-METHYLYCYTIDINE-5'-MONOPHOSPHATE
lig 20
OMG
E
34 24O2'-METHYLGUANOSINE-5'-MONOPHOSPHATE
lig 21
YYG
E
37 39 BUTYRIC ACID METHYL ESTER
lig 22
PSU
E
39 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 23
5MC
E
40 215-METHYLCYTIDINE-5'-MONOPHOSPHATE
lig 24
7MG
E
46 247N-METHYL-8-HYDROGUANOSINE-5'-MONOPHOSPHAT
lig 25
5MC
E
49 215-METHYLCYTIDINE-5'-MONOPHOSPHATE
lig 26
5MU
E
54 215-METHYLURIDINE 5'-MONOPHOSPHATE
lig 27
PSU
E
55 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 28
1MA
E
58 236-HYDRO-1-METHYLADENOSINE-5'-MONOPHOSPHATE
lig 29
2MG
F
10 242N-METHYLGUANOSINE-5'-MONOPHOSPHATE
lig 30
H2U
F
16 205,6-DIHYDROURIDINE-5'-MONOPHOSPHATE
lig 31
H2U
F
17 205,6-DIHYDROURIDINE-5'-MONOPHOSPHATE
lig 32
M2G
F
26 25N2-DIMETHYLGUANOSINE-5'-MONOPHOSPHATE
lig 33
OMC
F
32 21O2'-METHYLYCYTIDINE-5'-MONOPHOSPHATE
lig 34
OMG
F
34 24O2'-METHYLGUANOSINE-5'-MONOPHOSPHATE
lig 35
YYG
F
37 39 BUTYRIC ACID METHYL ESTER
lig 36
PSU
F
39 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 37
5MC
F
40 215-METHYLCYTIDINE-5'-MONOPHOSPHATE
lig 38
7MG
F
46 247N-METHYL-8-HYDROGUANOSINE-5'-MONOPHOSPHAT
lig 39
5MC
F
49 215-METHYLCYTIDINE-5'-MONOPHOSPHATE
lig 40
5MU
F
54 215-METHYLURIDINE 5'-MONOPHOSPHATE
lig 41
PSU
F
55 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 42
1MA
F
58 236-HYDRO-1-METHYLADENOSINE-5'-MONOPHOSPHATE
lig 43
MG
D
78 1MAGNESIUM ION
lig 44
PHE
D
77 11PHENYLALANINE
lig 45
MG
E
78 1MAGNESIUM ION
lig 46
MG
F
78 1MAGNESIUM ION
lig 47
PHE
E
77 11PHENYLALANINE
lig 48
MG
A
407 1MAGNESIUM ION
lig 49
PHE
F
77 11PHENYLALANINE
lig 50
GNP
A
406 32PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTE
lig 51
MG
B
407 1MAGNESIUM ION
lig 52
GNP
B
406 32PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTE
lig 53
MG
C
407 1MAGNESIUM ION
lig 54
GNP
C
406 32PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTE