Analysis of Ligand-Protein Contacts in PDB entry:
1CB8


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 7 ligands in PDB entry 1CB8. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
MAN
B
1 11ALPHA-D-MANNOPYRANOSE
lig 2
GCU
B
2 12ALPHA-D-GLUCOPYRANURONIC ACID
lig 3
XYP
B
3 9BETA-D-XYLOPYRANOSE
lig 4
MFU
B
4 11METHYL ALPHA-L-FUCOPYRANOSIDE
lig 5
RAM
B
5 10ALPHA-L-RHAMNOPYRANOSE
lig 6
CA
A
3000 1CALCIUM ION
lig 7
GOL
A
2010 6GLYCEROL