Analysis of Ligand-Protein Contacts in PDB entry:
1GKK


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

Note, this PDB entry contains modified residue(s) PHOSPHOSERINE (SEP) . This residue is treated as heterogroup (ligand) both in the PDB entry and by LPC/CSU analysis.


There are 13 ligands in PDB entry 1GKK. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
SEP
A
954 7PHOSPHOSERINE
lig 2
SEP
B
954 7PHOSPHOSERINE
lig 3
CD
A
3086 1CADMIUM ION
lig 4
CD
A
3087 1CADMIUM ION
lig 5
CD
A
3088 1CADMIUM ION
lig 6
CD
A
3089 1CADMIUM ION
lig 7
CD
A
3090 1CADMIUM ION
lig 8
CD
B
3086 1CADMIUM ION
lig 9
CD
B
3087 1CADMIUM ION
lig 10
CD
B
3088 1CADMIUM ION
lig 11
CD
B
3089 1CADMIUM ION
lig 12
CD
B
3090 1CADMIUM ION
lig 13
GOL
B
3091 6GLYCEROL