Analysis of Ligand-Protein Contacts in PDB entry:
1GVM


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 22 ligands in PDB entry 1GVM. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
CHT
A
401 7CHOLINE ION
lig 2
CHT
A
402 7CHOLINE ION
lig 3
CHT
A
403 7CHOLINE ION
lig 4
CHT
A
404 7CHOLINE ION
lig 5
CHT
B
401 7CHOLINE ION
lig 6
CHT
B
402 7CHOLINE ION
lig 7
CHT
B
403 7CHOLINE ION
lig 8
CHT
B
404 7CHOLINE ION
lig 9
CHT
C
401 7CHOLINE ION
lig 10
CHT
C
402 7CHOLINE ION
lig 11
CHT
C
403 7CHOLINE ION
lig 12
CHT
C
404 7CHOLINE ION
lig 13
CHT
D
402 7CHOLINE ION
lig 14
CHT
D
403 7CHOLINE ION
lig 15
CHT
D
404 7CHOLINE ION
lig 16
CHT
E
414 7CHOLINE ION
lig 17
CHT
F
400 7CHOLINE ION
lig 18
CHT
F
401 7CHOLINE ION
lig 19
CHT
F
402 7CHOLINE ION
lig 20
CHT
F
403 7CHOLINE ION
lig 21
DDQ
F
404 14DECYLAMINE-N,N-DIMETHYL-N-OXIDE
lig 22
TRS
F
1319 82-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL