Analysis of Ligand-Protein Contacts in PDB entry:
1HMU


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 11 ligands in PDB entry 1HMU. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
MAN
B
1 11ALPHA-D-MANNOPYRANOSE
lig 2
GCU
B
2 12ALPHA-D-GLUCOPYRANURONIC ACID
lig 3
XYP
B
3 9BETA-D-XYLOPYRANOSE
lig 4
MXY
B
4 112-O-METHYL-BETA-L-FUCOPYRANOSE
lig 5
RAM
B
5 10ALPHA-L-RHAMNOPYRANOSE
lig 6
MAN
C
1 11ALPHA-D-MANNOPYRANOSE
lig 7
GCU
C
2 12ALPHA-D-GLUCOPYRANURONIC ACID
lig 8
RAM
C
3 10ALPHA-L-RHAMNOPYRANOSE
lig 9
ASG
D
1 192-ACETAMIDO-2-DEOXY-4-O-SULFO-BETA-D-GALAC
lig 10
GCD
D
2 114-DEOXY-ALPHA-L-THREO-HEX-4-ENOPYRANURONIC
lig 11
CA
A
1801 1CALCIUM ION