Analysis of Ligand-Protein Contacts in PDB entry:
1IB1


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

Note, this PDB entry contains modified residue(s) PHOSPHOTHREONINE (TPO) . This residue is treated as heterogroup (ligand) both in the PDB entry and by LPC/CSU analysis.


There are 8 ligands in PDB entry 1IB1. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
TPO
E
31 11PHOSPHOTHREONINE
lig 2
TPO
F
31 11PHOSPHOTHREONINE
lig 3
TPO
G
31 11PHOSPHOTHREONINE
lig 4
TPO
H
31 11PHOSPHOTHREONINE
lig 5
COT
E
401 63COA-S-ACETYL TRYPTAMINE
lig 6
COT
F
400 63COA-S-ACETYL TRYPTAMINE
lig 7
COT
G
402 63COA-S-ACETYL TRYPTAMINE
lig 8
COT
H
403 63COA-S-ACETYL TRYPTAMINE