Analysis of Ligand-Protein Contacts in PDB entry:
1JYX


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 103 ligands in PDB entry 1JYX. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
MG
A
3001 1MAGNESIUM ION
lig 2
MG
A
3002 1MAGNESIUM ION
lig 3
NA
A
3101 1SODIUM ION
lig 4
NA
A
3102 1SODIUM ION
lig 5
NA
A
3103 1SODIUM ION
lig 6
IPT
A
2001 151-METHYLETHYL 1-THIO-BETA-D-GALACTOPYRANOS
lig 7
IPT
A
2002 151-METHYLETHYL 1-THIO-BETA-D-GALACTOPYRANOS
lig 8
DMS
A
8401 4DIMETHYL SULFOXIDE
lig 9
DMS
A
8402 4DIMETHYL SULFOXIDE
lig 10
DMS
A
8403 4DIMETHYL SULFOXIDE
lig 11
DMS
A
8404 4DIMETHYL SULFOXIDE
lig 12
DMS
A
8405 4DIMETHYL SULFOXIDE
lig 13
DMS
A
8407 4DIMETHYL SULFOXIDE
lig 14
DMS
A
8408 4DIMETHYL SULFOXIDE
lig 15
DMS
A
8409 4DIMETHYL SULFOXIDE
lig 16
DMS
A
8410 4DIMETHYL SULFOXIDE
lig 17
DMS
A
8411 4DIMETHYL SULFOXIDE
lig 18
DMS
A
8412 4DIMETHYL SULFOXIDE
lig 19
DMS
A
8413 4DIMETHYL SULFOXIDE
lig 20
DMS
A
8415 4DIMETHYL SULFOXIDE
lig 21
DMS
A
8420 4DIMETHYL SULFOXIDE
lig 22
DMS
A
8421 4DIMETHYL SULFOXIDE
lig 23
DMS
A
8501 4DIMETHYL SULFOXIDE
lig 24
DMS
A
8502 4DIMETHYL SULFOXIDE
lig 25
DMS
A
8602 4DIMETHYL SULFOXIDE
lig 26
MG
B
3001 1MAGNESIUM ION
lig 27
MG
B
3002 1MAGNESIUM ION
lig 28
MG
B
3007 1MAGNESIUM ION
lig 29
NA
B
3101 1SODIUM ION
lig 30
NA
B
3102 1SODIUM ION
lig 31
NA
B
3103 1SODIUM ION
lig 32
NA
B
3104 1SODIUM ION
lig 33
IPT
B
2001 151-METHYLETHYL 1-THIO-BETA-D-GALACTOPYRANOS
lig 34
DMS
B
8401 4DIMETHYL SULFOXIDE
lig 35
DMS
B
8402 4DIMETHYL SULFOXIDE
lig 36
DMS
B
8403 4DIMETHYL SULFOXIDE
lig 37
DMS
B
8404 4DIMETHYL SULFOXIDE
lig 38
DMS
B
8405 4DIMETHYL SULFOXIDE
lig 39
DMS
B
8406 4DIMETHYL SULFOXIDE
lig 40
DMS
B
8407 4DIMETHYL SULFOXIDE
lig 41
DMS
B
8408 4DIMETHYL SULFOXIDE
lig 42
DMS
B
8409 4DIMETHYL SULFOXIDE
lig 43
DMS
B
8410 4DIMETHYL SULFOXIDE
lig 44
DMS
B
8411 4DIMETHYL SULFOXIDE
lig 45
DMS
B
8412 4DIMETHYL SULFOXIDE
lig 46
DMS
B
8413 4DIMETHYL SULFOXIDE
lig 47
DMS
B
8420 4DIMETHYL SULFOXIDE
lig 48
DMS
B
8421 4DIMETHYL SULFOXIDE
lig 49
DMS
B
8425 4DIMETHYL SULFOXIDE
lig 50
DMS
B
8501 4DIMETHYL SULFOXIDE
lig 51
DMS
B
8502 4DIMETHYL SULFOXIDE
lig 52
MG
C
3001 1MAGNESIUM ION
lig 53
MG
C
3002 1MAGNESIUM ION
lig 54
NA
C
3101 1SODIUM ION
lig 55
NA
C
3102 1SODIUM ION
lig 56
NA
C
3103 1SODIUM ION
lig 57
NA
C
3104 1SODIUM ION
lig 58
IPT
C
2001 151-METHYLETHYL 1-THIO-BETA-D-GALACTOPYRANOS
lig 59
DMS
C
8401 4DIMETHYL SULFOXIDE
lig 60
DMS
C
8402 4DIMETHYL SULFOXIDE
lig 61
DMS
C
8403 4DIMETHYL SULFOXIDE
lig 62
DMS
C
8404 4DIMETHYL SULFOXIDE
lig 63
DMS
C
8405 4DIMETHYL SULFOXIDE
lig 64
DMS
C
8406 4DIMETHYL SULFOXIDE
lig 65
DMS
C
8407 4DIMETHYL SULFOXIDE
lig 66
DMS
C
8408 4DIMETHYL SULFOXIDE
lig 67
DMS
C
8409 4DIMETHYL SULFOXIDE
lig 68
DMS
C
8410 4DIMETHYL SULFOXIDE
lig 69
DMS
C
8411 4DIMETHYL SULFOXIDE
lig 70
DMS
C
8412 4DIMETHYL SULFOXIDE
lig 71
DMS
C
8414 4DIMETHYL SULFOXIDE
lig 72
DMS
C
8415 4DIMETHYL SULFOXIDE
lig 73
DMS
C
8420 4DIMETHYL SULFOXIDE
lig 74
DMS
C
8421 4DIMETHYL SULFOXIDE
lig 75
DMS
C
8422 4DIMETHYL SULFOXIDE
lig 76
DMS
C
8425 4DIMETHYL SULFOXIDE
lig 77
DMS
C
8501 4DIMETHYL SULFOXIDE
lig 78
DMS
C
8503 4DIMETHYL SULFOXIDE
lig 79
DMS
C
8506 4DIMETHYL SULFOXIDE
lig 80
MG
D
3001 1MAGNESIUM ION
lig 81
MG
D
3002 1MAGNESIUM ION
lig 82
NA
D
3101 1SODIUM ION
lig 83
NA
D
3102 1SODIUM ION
lig 84
NA
D
3103 1SODIUM ION
lig 85
IPT
D
2001 151-METHYLETHYL 1-THIO-BETA-D-GALACTOPYRANOS
lig 86
IPT
D
2002 151-METHYLETHYL 1-THIO-BETA-D-GALACTOPYRANOS
lig 87
DMS
D
8401 4DIMETHYL SULFOXIDE
lig 88
DMS
D
8402 4DIMETHYL SULFOXIDE
lig 89
DMS
D
8403 4DIMETHYL SULFOXIDE
lig 90
DMS
D
8404 4DIMETHYL SULFOXIDE
lig 91
DMS
D
8405 4DIMETHYL SULFOXIDE
lig 92
DMS
D
8407 4DIMETHYL SULFOXIDE
lig 93
DMS
D
8408 4DIMETHYL SULFOXIDE
lig 94
DMS
D
8409 4DIMETHYL SULFOXIDE
lig 95
DMS
D
8410 4DIMETHYL SULFOXIDE
lig 96
DMS
D
8411 4DIMETHYL SULFOXIDE
lig 97
DMS
D
8412 4DIMETHYL SULFOXIDE
lig 98
DMS
D
8413 4DIMETHYL SULFOXIDE
lig 99
DMS
D
8414 4DIMETHYL SULFOXIDE
lig 100
DMS
D
8415 4DIMETHYL SULFOXIDE
lig 101
DMS
D
8417 4DIMETHYL SULFOXIDE
lig 102
DMS
D
8501 4DIMETHYL SULFOXIDE
lig 103
DMS
D
8704 4DIMETHYL SULFOXIDE