Analysis of Ligand-Protein Contacts in PDB entry:
1LVW


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 26 ligands in PDB entry 1LVW. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
CL
A
4001 1CHLORIDE ION
lig 2
SO4
A
5001 5SULFATE ION
lig 3
TYD
A
3001 25THYMIDINE-5'-DIPHOSPHATE
lig 4
TYD
A
3002 25THYMIDINE-5'-DIPHOSPHATE
lig 5
GOL
A
2005 6GLYCEROL
lig 6
GOL
A
2007 6GLYCEROL
lig 7
GOL
A
2009 6GLYCEROL
lig 8
CL
B
4002 1CHLORIDE ION
lig 9
TYD
B
3003 25THYMIDINE-5'-DIPHOSPHATE
lig 10
TYD
B
3004 25THYMIDINE-5'-DIPHOSPHATE
lig 11
GOL
B
2002 6GLYCEROL
lig 12
GOL
B
2008 6GLYCEROL
lig 13
GOL
B
2011 6GLYCEROL
lig 14
CL
C
4003 1CHLORIDE ION
lig 15
CL
C
4005 1CHLORIDE ION
lig 16
TYD
C
3005 25THYMIDINE-5'-DIPHOSPHATE
lig 17
TYD
C
3006 25THYMIDINE-5'-DIPHOSPHATE
lig 18
GOL
C
2001 6GLYCEROL
lig 19
GOL
C
2003 6GLYCEROL
lig 20
GOL
C
2010 6GLYCEROL
lig 21
CL
D
4004 1CHLORIDE ION
lig 22
SO4
D
5002 5SULFATE ION
lig 23
TYD
D
3007 25THYMIDINE-5'-DIPHOSPHATE
lig 24
TYD
D
3008 25THYMIDINE-5'-DIPHOSPHATE
lig 25
GOL
D
2004 6GLYCEROL
lig 26
GOL
D
2006 6GLYCEROL