Analysis of Ligand-Protein Contacts in PDB entry:
1ND5


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 25 ligands in PDB entry 1ND5. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
E
1 152-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
E
2 152-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
NAG
F
1 152-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
NAG
F
2 152-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
NAG
G
1 152-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
NAG
G
2 152-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 7
NAG
H
1 152-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
NAG
H
2 152-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
NAG
I
1 152-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
NAG
I
2 152-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
MAN
I
3 12ALPHA-D-MANNOPYRANOSE
lig 12
2BF
A
6000 19ALPHA-BENZYL-AMINOBENZYL-PHOSPHONIC ACID
lig 13
1PE
A
7000 16PENTAETHYLENE GLYCOL
lig 14
1PE
A
7004 16PENTAETHYLENE GLYCOL
lig 15
1PE
A
7007 16PENTAETHYLENE GLYCOL
lig 16
NDG
B
5004 152-ACETAMIDO-2-DEOXY-ALPHA-D-GLUCOPYRANOSE
lig 17
2BF
B
6001 19ALPHA-BENZYL-AMINOBENZYL-PHOSPHONIC ACID
lig 18
1PE
B
7001 16PENTAETHYLENE GLYCOL
lig 19
1PE
B
7005 16PENTAETHYLENE GLYCOL
lig 20
2BF
C
6002 19ALPHA-BENZYL-AMINOBENZYL-PHOSPHONIC ACID
lig 21
1PE
C
7002 16PENTAETHYLENE GLYCOL
lig 22
1PE
C
7006 16PENTAETHYLENE GLYCOL
lig 23
NAG
D
5009 152-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 24
2BF
D
6003 19ALPHA-BENZYL-AMINOBENZYL-PHOSPHONIC ACID
lig 25
1PE
D
7003 16PENTAETHYLENE GLYCOL