Analysis of Ligand-Protein Contacts in PDB entry:
1QMG


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 17 ligands in PDB entry 1QMG. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
APX
A
600 402'-MONOPHOSPHOADENOSINE-5'-DIPHOSPHORIBOSE
lig 2
MN
A
601 1MANGANESE (II) ION
lig 3
MN
A
602 1MANGANESE (II) ION
lig 4
SO4
A
603 5SULFATE ION
lig 5
DMV
A
620 102,3-DIHYDROXY-VALERIANIC ACID
lig 6
APX
B
600 402'-MONOPHOSPHOADENOSINE-5'-DIPHOSPHORIBOSE
lig 7
MN
B
601 1MANGANESE (II) ION
lig 8
MN
B
602 1MANGANESE (II) ION
lig 9
DMV
B
620 102,3-DIHYDROXY-VALERIANIC ACID
lig 10
APX
C
600 402'-MONOPHOSPHOADENOSINE-5'-DIPHOSPHORIBOSE
lig 11
MN
C
601 1MANGANESE (II) ION
lig 12
MN
C
602 1MANGANESE (II) ION
lig 13
DMV
C
620 102,3-DIHYDROXY-VALERIANIC ACID
lig 14
APX
D
600 402'-MONOPHOSPHOADENOSINE-5'-DIPHOSPHORIBOSE
lig 15
MN
D
601 1MANGANESE (II) ION
lig 16
MN
D
602 1MANGANESE (II) ION
lig 17
DMV
D
620 102,3-DIHYDROXY-VALERIANIC ACID