Analysis of Ligand-Protein Contacts in PDB entry:
1VAQ


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 26 ligands in PDB entry 1VAQ. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
ARI
E
1 12 ACETATE
lig 2
1GL
E
2 112,6-DIDEOXY-4-O-METHYL-ALPHA-D-GALACTOPYRA
lig 3
ARI
F
1 12 ACETATE
lig 4
1GL
F
2 112,6-DIDEOXY-4-O-METHYL-ALPHA-D-GALACTOPYRA
lig 5
CDR
G
1 9(2R,5S,6R)-6-METHYLTETRAHYDRO-2H-PYRAN-2,5
lig 6
CDR
G
2 9(2R,5S,6R)-6-METHYLTETRAHYDRO-2H-PYRAN-2,5
lig 7
ERI
G
3 143-C-METHYL-4-O-ACETYL-ALPHA-L-OLIVOPYRANOS
lig 8
CDR
H
1 9(2R,5S,6R)-6-METHYLTETRAHYDRO-2H-PYRAN-2,5
lig 9
CDR
H
2 9(2R,5S,6R)-6-METHYLTETRAHYDRO-2H-PYRAN-2,5
lig 10
ERI
H
3 143-C-METHYL-4-O-ACETYL-ALPHA-L-OLIVOPYRANOS
lig 11
ARI
I
1 12 ACETATE
lig 12
1GL
I
2 112,6-DIDEOXY-4-O-METHYL-ALPHA-D-GALACTOPYRA
lig 13
CDR
J
1 9(2R,5S,6R)-6-METHYLTETRAHYDRO-2H-PYRAN-2,5
lig 14
CDR
J
2 9(2R,5S,6R)-6-METHYLTETRAHYDRO-2H-PYRAN-2,5
lig 15
ERI
J
3 143-C-METHYL-4-O-ACETYL-ALPHA-L-OLIVOPYRANOS
lig 16
ARI
K
1 12 ACETATE
lig 17
1GL
K
2 112,6-DIDEOXY-4-O-METHYL-ALPHA-D-GALACTOPYRA
lig 18
CDR
L
1 9(2R,5S,6R)-6-METHYLTETRAHYDRO-2H-PYRAN-2,5
lig 19
CDR
L
2 9(2R,5S,6R)-6-METHYLTETRAHYDRO-2H-PYRAN-2,5
lig 20
ERI
L
3 143-C-METHYL-4-O-ACETYL-ALPHA-L-OLIVOPYRANOS
lig 21
MG
A
81 1MAGNESIUM ION
lig 22
CPH
A
33 28 TETRAHYDROANTHRACEN-2-YL]-D-XYLULOSE
lig 23
CPH
B
23 28 TETRAHYDROANTHRACEN-2-YL]-D-XYLULOSE
lig 24
CPH
C
73 28 TETRAHYDROANTHRACEN-2-YL]-D-XYLULOSE
lig 25
MG
D
82 1MAGNESIUM ION
lig 26
CPH
D
63 28 TETRAHYDROANTHRACEN-2-YL]-D-XYLULOSE