Analysis of Ligand-Protein Contacts in PDB entry:
1Y5M


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 8 ligands in PDB entry 1Y5M. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
SO4
A
293 5SULFATE ION
lig 2
SO4
A
294 5SULFATE ION
lig 3
NDP
A
1 48 PHOSPHATE
lig 4
OCT
A
301 8N-OCTANE
lig 5
SO4
B
293 5SULFATE ION
lig 6
SO4
B
294 5SULFATE ION
lig 7
NDP
B
2 48 PHOSPHATE
lig 8
OCT
B
302 8N-OCTANE