Analysis of Ligand-Protein Contacts in PDB entry:
1YPV


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 6 ligands in PDB entry 1YPV. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
SCH
A
43 8S-METHYL-THIO-CYSTEINE
lig 2
CME
A
180 10S,S-(2-HYDROXYETHYL)THIOCYSTEINE
lig 3
CME
A
195 7S,S-(2-HYDROXYETHYL)THIOCYSTEINE
lig 4
CME
A
199 10S,S-(2-HYDROXYETHYL)THIOCYSTEINE
lig 5
PO4
A
316 5PHOSPHATE ION
lig 6
PO4
A
317 5PHOSPHATE ION