Analysis of Ligand-Protein Contacts in PDB entry:
2B5T


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 48 ligands in PDB entry 2B5T. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
E
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
FUC
E
2 10ALPHA-L-FUCOPYRANOSE
lig 3
NAG
F
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
FUC
F
2 10ALPHA-L-FUCOPYRANOSE
lig 5
GU3
G
1 22 GLUCOPYRANOSIDE
lig 6
GU2
G
2 142,3-DI-O-METHYL-ALPHA-L-IDOPYRANURONIC ACI
lig 7
GU6
G
3 232,3,6-TRI-O-SULFO-ALPHA-D-GLUCOPYRANOSE
lig 8
GU1
G
4 142,3-DI-O-METHYL-BETA-D-GLUCOPYRANURONIC AC
lig 9
GU5
G
5 172,3-DI-O-METHYL-6-O-SULFONATO-ALPHA-D-GLUC
lig 10
GU8
G
6 142,3,6-TRI-O-METHYL-BETA-D-GLUCOPYRANOSE
lig 11
GU9
G
7 142,3,6-TRI-O-METHYL-ALPHA-D-GLUCOPYRANOSE
lig 12
GU8
G
8 142,3,6-TRI-O-METHYL-BETA-D-GLUCOPYRANOSE
lig 13
GU9
G
9 142,3,6-TRI-O-METHYL-ALPHA-D-GLUCOPYRANOSE
lig 14
GU8
G
10 142,3,6-TRI-O-METHYL-BETA-D-GLUCOPYRANOSE
lig 15
GU9
G
11 142,3,6-TRI-O-METHYL-ALPHA-D-GLUCOPYRANOSE
lig 16
GU8
G
12 142,3,6-TRI-O-METHYL-BETA-D-GLUCOPYRANOSE
lig 17
GU5
G
13 172,3-DI-O-METHYL-6-O-SULFONATO-ALPHA-D-GLUC
lig 18
GU0
G
14 232,3,6-TRI-O-SULFONATO-BETA-D-GLUCOPYRANOSE
lig 19
GU6
G
15 232,3,6-TRI-O-SULFO-ALPHA-D-GLUCOPYRANOSE
lig 20
GU4
G
16 272,3,4,6-TETRA-O-SULFONATO-ALPHA-D-GLUCOPYR
lig 21
NAG
H
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 22
NAG
H
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 23
BMA
H
3 11BETA-D-MANNOPYRANOSE
lig 24
MAN
H
4 11ALPHA-D-MANNOPYRANOSE
lig 25
MAN
H
5 10ALPHA-D-MANNOPYRANOSE
lig 26
MAN
H
6 11ALPHA-D-MANNOPYRANOSE
lig 27
FUC
H
7 10ALPHA-L-FUCOPYRANOSE
lig 28
NAG
J
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 29
NAG
J
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 30
GOL
A
1102 6GLYCEROL
lig 31
GOL
A
1108 6GLYCEROL
lig 32
SO4
B
2001 5SULFATE ION
lig 33
SO4
B
2002 5SULFATE ION
lig 34
SO4
B
2003 5SULFATE ION
lig 35
SO4
B
2006 5SULFATE ION
lig 36
GOL
B
1101 6GLYCEROL
lig 37
GOL
B
1103 6GLYCEROL
lig 38
GOL
B
1104 6GLYCEROL
lig 39
GOL
B
1105 6GLYCEROL
lig 40
GOL
B
1109 6GLYCEROL
lig 41
SO4
D
2004 5SULFATE ION
lig 42
GOL
D
1106 6GLYCEROL
lig 43
GOL
D
1107 6GLYCEROL
lig 44
GOL
D
1110 6GLYCEROL
lig 45
GOL
D
1111 6GLYCEROL
lig 46
NAG
I
801 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 47
SO4
I
2005 5SULFATE ION
lig 48
GOL
I
1112 6GLYCEROL