Analysis of Ligand-Protein Contacts in PDB entry:
2DFD


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 19 ligands in PDB entry 2DFD. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
MLT
A
3104 9MALATE ION
lig 2
CL
A
3203 1CHLORIDE ION
lig 3
CL
A
3205 1CHLORIDE ION
lig 4
NAD
A
3003 44NICOTINAMIDE-ADENINE-DINUCLEOTIDE
lig 5
HIS
A
3301 10HISTIDINE
lig 6
ALA
A
3302 5ALANINE
lig 7
MLT
B
3102 9MALATE ION
lig 8
CL
B
3206 1CHLORIDE ION
lig 9
NAD
B
3001 44NICOTINAMIDE-ADENINE-DINUCLEOTIDE
lig 10
HIS
B
3401 10HISTIDINE
lig 11
MLT
C
3103 9MALATE ION
lig 12
CL
C
3201 1CHLORIDE ION
lig 13
CL
C
3204 1CHLORIDE ION
lig 14
NAD
C
3002 44NICOTINAMIDE-ADENINE-DINUCLEOTIDE
lig 15
HIS
C
3501 10HISTIDINE
lig 16
MLT
D
3101 9MALATE ION
lig 17
CL
D
3202 1CHLORIDE ION
lig 18
CL
D
3207 1CHLORIDE ION
lig 19
NAD
D
3004 44NICOTINAMIDE-ADENINE-DINUCLEOTIDE