Analysis of Ligand-Protein Contacts in PDB entry:
2MSD


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 82 ligands in PDB entry 2MSD. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
PCW
A
1 541,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 2
PCW
A
2 541,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 3
PCW
A
3 541,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 4
PCW
A
4 541,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 5
PCW
A
5 541,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 6
PCW
A
6 541,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 7
PCW
A
7 541,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 8
PCW
A
8 541,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 9
PCW
A
9 541,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 10
PCW
A
10 541,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 11
PCW
A
11 541,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 12
PCW
A
12 541,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 13
PCW
A
13 541,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 14
PCW
A
14 541,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 15
PCW
A
15 541,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 16
PCW
A
16 541,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 17
PCW
A
17 541,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 18
PCW
A
18 541,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 19
PCW
A
19 541,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 20
PCW
A
20 541,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 21
PCW
A
21 541,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 22
PCW
A
22 541,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 23
PCW
A
23 541,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 24
PCW
A
24 541,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 25
PCW
A
25 541,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 26
PCW
A
26 541,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 27
PCW
A
27 541,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 28
PCW
A
28 541,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 29
PCW
A
29 541,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 30
PCW
A
30 541,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 31
PCW
A
31 541,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 32
PCW
A
32 541,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 33
17F
A
33 54 ENOYLOXY]PROPYL}OXY)(HYDROXY)PHOSPHORYL]-
lig 34
17F
A
34 54 ENOYLOXY]PROPYL}OXY)(HYDROXY)PHOSPHORYL]-
lig 35
17F
A
35 54 ENOYLOXY]PROPYL}OXY)(HYDROXY)PHOSPHORYL]-
lig 36
17F
A
36 54 ENOYLOXY]PROPYL}OXY)(HYDROXY)PHOSPHORYL]-
lig 37
17F
A
37 54 ENOYLOXY]PROPYL}OXY)(HYDROXY)PHOSPHORYL]-
lig 38
17F
A
38 54 ENOYLOXY]PROPYL}OXY)(HYDROXY)PHOSPHORYL]-
lig 39
17F
A
39 54 ENOYLOXY]PROPYL}OXY)(HYDROXY)PHOSPHORYL]-
lig 40
17F
A
40 54 ENOYLOXY]PROPYL}OXY)(HYDROXY)PHOSPHORYL]-
lig 41
PCW
A
41 541,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 42
PCW
A
42 541,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 43
PCW
A
43 541,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 44
PCW
A
44 541,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 45
PCW
A
45 541,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 46
PCW
A
46 541,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 47
PCW
A
47 541,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 48
PCW
A
48 541,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 49
PCW
A
49 541,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 50
PCW
A
50 541,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 51
PCW
A
51 541,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 52
PCW
A
52 541,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 53
PCW
A
53 541,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 54
PCW
A
54 541,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 55
PCW
A
55 541,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 56
PCW
A
56 541,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 57
PCW
A
57 541,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 58
PCW
A
58 541,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 59
PCW
A
59 541,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 60
PCW
A
60 541,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 61
PCW
A
61 541,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 62
PCW
A
62 541,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 63
PCW
A
63 541,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 64
PCW
A
64 541,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 65
PCW
A
65 541,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 66
PCW
A
66 541,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 67
PCW
A
67 541,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 68
PCW
A
68 541,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 69
PCW
A
69 541,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 70
PCW
A
70 541,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 71
PCW
A
71 541,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 72
PCW
A
72 541,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 73
17F
A
73 54 ENOYLOXY]PROPYL}OXY)(HYDROXY)PHOSPHORYL]-
lig 74
17F
A
74 54 ENOYLOXY]PROPYL}OXY)(HYDROXY)PHOSPHORYL]-
lig 75
17F
A
75 54 ENOYLOXY]PROPYL}OXY)(HYDROXY)PHOSPHORYL]-
lig 76
17F
A
76 54 ENOYLOXY]PROPYL}OXY)(HYDROXY)PHOSPHORYL]-
lig 77
17F
A
77 54 ENOYLOXY]PROPYL}OXY)(HYDROXY)PHOSPHORYL]-
lig 78
17F
A
78 54 ENOYLOXY]PROPYL}OXY)(HYDROXY)PHOSPHORYL]-
lig 79
17F
A
79 54 ENOYLOXY]PROPYL}OXY)(HYDROXY)PHOSPHORYL]-
lig 80
17F
A
80 54 ENOYLOXY]PROPYL}OXY)(HYDROXY)PHOSPHORYL]-
lig 81
GNP
B
201 32PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTE
lig 82
MG
B
202 1MAGNESIUM ION