Analysis of Ligand-Protein Contacts in PDB entry:
2RD9


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 16 ligands in PDB entry 2RD9. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NI
A
300 1NICKEL (II) ION
lig 2
IMD
A
301 5IMIDAZOLE
lig 3
IMD
A
302 5IMIDAZOLE
lig 4
IMD
A
303 5IMIDAZOLE
lig 5
GOL
A
304 6GLYCEROL
lig 6
GOL
A
305 6GLYCEROL
lig 7
GOL
A
306 6GLYCEROL
lig 8
NI
B
300 1NICKEL (II) ION
lig 9
GOL
B
301 6GLYCEROL
lig 10
NI
C
300 1NICKEL (II) ION
lig 11
IMD
C
301 5IMIDAZOLE
lig 12
IMD
C
302 5IMIDAZOLE
lig 13
GOL
C
303 6GLYCEROL
lig 14
NI
D
300 1NICKEL (II) ION
lig 15
GOL
D
301 6GLYCEROL
lig 16
GOL
D
302 6GLYCEROL