Analysis of Ligand-Protein Contacts in PDB entry:
2DCJ


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 20 ligands in PDB entry 2DCJ. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
CA
A
1001 1CALCIUM ION
lig 2
CA
A
1003 1CALCIUM ION
lig 3
MPD
A
2001 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 4
MPD
A
2003 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 5
GOL
A
3002 6GLYCEROL
lig 6
GOL
A
3004 6GLYCEROL
lig 7
GOL
A
3005 6GLYCEROL
lig 8
GOL
A
3006 6GLYCEROL
lig 9
GOL
A
3007 6GLYCEROL
lig 10
GOL
A
3009 6GLYCEROL
lig 11
GOL
A
3011 6GLYCEROL
lig 12
CA
B
1002 1CALCIUM ION
lig 13
CA
B
1004 1CALCIUM ION
lig 14
MPD
B
2002 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 15
MPD
B
2004 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 16
GOL
B
3001 6GLYCEROL
lig 17
GOL
B
3003 6GLYCEROL
lig 18
GOL
B
3008 6GLYCEROL
lig 19
GOL
B
3010 6GLYCEROL
lig 20
GOL
B
3012 6GLYCEROL