Analysis of Ligand-Protein Contacts in PDB entry:
2Q8D


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 8 ligands in PDB entry 2Q8D. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
MLY
F
36 11N-DIMETHYL-LYSINE
lig 2
MLY
G
36 11N-DIMETHYL-LYSINE
lig 3
NI
A
501 1NICKEL (II) ION
lig 4
ZN
A
505 1ZINC ION
lig 5
SIN
A
503 8SUCCINIC ACID
lig 6
NI
B
502 1NICKEL (II) ION
lig 7
ZN
B
506 1ZINC ION
lig 8
SIN
B
504 8SUCCINIC ACID