Analysis of Ligand-Protein Contacts in PDB entry:
2V53


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 25 ligands in PDB entry 2V53. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
HYP
B
3 84-HYDROXYPROLINE
lig 2
HYP
B
6 84-HYDROXYPROLINE
lig 3
HYP
B
9 84-HYDROXYPROLINE
lig 4
HYP
B
18 84-HYDROXYPROLINE
lig 5
HYP
B
24 84-HYDROXYPROLINE
lig 6
HYP
B
30 84-HYDROXYPROLINE
lig 7
HYP
B
33 84-HYDROXYPROLINE
lig 8
HYP
C
3 84-HYDROXYPROLINE
lig 9
HYP
C
6 84-HYDROXYPROLINE
lig 10
HYP
C
9 84-HYDROXYPROLINE
lig 11
HYP
C
18 84-HYDROXYPROLINE
lig 12
HYP
C
24 84-HYDROXYPROLINE
lig 13
HYP
C
30 84-HYDROXYPROLINE
lig 14
HYP
C
33 84-HYDROXYPROLINE
lig 15
HYP
D
3 84-HYDROXYPROLINE
lig 16
HYP
D
6 84-HYDROXYPROLINE
lig 17
HYP
D
9 84-HYDROXYPROLINE
lig 18
HYP
D
18 84-HYDROXYPROLINE
lig 19
HYP
D
24 84-HYDROXYPROLINE
lig 20
HYP
D
30 84-HYDROXYPROLINE
lig 21
HYP
D
33 84-HYDROXYPROLINE
lig 22
NAG
E
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 23
NAG
E
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 24
CA
A
301 1CALCIUM ION
lig 25
SO4
D
401 5SULFATE ION