Analysis of Ligand-Protein Contacts in PDB entry:
2Y69


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

Note, this PDB entry contains modified residue(s) PHOSPHOTHREONINE (TPO) . This residue is treated as heterogroup (ligand) both in the PDB entry and by LPC/CSU analysis.


There are 30 ligands in PDB entry 2Y69. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
TPO
G
11 11PHOSPHOTHREONINE
lig 2
TPO
T
11 11PHOSPHOTHREONINE
lig 3
HEA
A
515 60HEME-A
lig 4
HEA
A
516 60HEME-A
lig 5
CU
A
517 1COPPER (II) ION
lig 6
OXY
A
1515 2OXYGEN MOLECULE
lig 7
MG
A
1516 1MAGNESIUM ION
lig 8
CHD
A
1517 29CHOLIC ACID
lig 9
CUA
B
228 2DINUCLEAR COPPER ION
lig 10
PEK
C
1262 53 11,14-TETRAENOATE
lig 11
PGV
C
1263 51 OCTADEC-11-ENOATE
lig 12
PGV
C
1264 51 OCTADEC-11-ENOATE
lig 13
CHD
C
1265 29CHOLIC ACID
lig 14
ZN
F
1097 1ZINC ION
lig 15
CHD
G
1085 29CHOLIC ACID
lig 16
DMU
M
1044 33DECYL-BETA-D-MALTOPYRANOSIDE
lig 17
HEA
N
515 60HEME-A
lig 18
HEA
N
516 60HEME-A
lig 19
CU
N
517 1COPPER (II) ION
lig 20
OXY
N
1515 2OXYGEN MOLECULE
lig 21
MG
N
1516 1MAGNESIUM ION
lig 22
CHD
N
1517 29CHOLIC ACID
lig 23
CUA
O
228 2DINUCLEAR COPPER ION
lig 24
PEK
P
1262 53 11,14-TETRAENOATE
lig 25
PGV
P
1263 51 OCTADEC-11-ENOATE
lig 26
PGV
P
1264 51 OCTADEC-11-ENOATE
lig 27
CHD
P
1265 29CHOLIC ACID
lig 28
ZN
S
1097 1ZINC ION
lig 29
CHD
T
1085 29CHOLIC ACID
lig 30
DMU
Z
1043 33DECYL-BETA-D-MALTOPYRANOSIDE