Analysis of Ligand-Protein Contacts in PDB entry:
3M8D


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 11 ligands in PDB entry 3M8D. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
CNC
A
701 93CYANOCOBALAMIN
lig 2
C8E
A
702 21(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE
lig 3
C8E
A
703 21(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE
lig 4
C8E
A
704 21(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE
lig 5
C8E
A
705 21(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE
lig 6
C8E
A
706 21(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE
lig 7
C8E
A
707 21(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE
lig 8
MTN
A
708 12 YL)METHYL] METHANESULFONOTHIOATE
lig 9
CA
A
709 1CALCIUM ION
lig 10
CA
A
710 1CALCIUM ION
lig 11
CA
A
711 1CALCIUM ION