Analysis of Ligand-Protein Contacts in PDB entry:
3D11


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 29 ligands in PDB entry 3D11. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
B
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
B
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
NAG
D
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
NAG
D
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 7
BMA
D
3 11BETA-D-MANNOPYRANOSE
lig 8
BMA
D
4 11BETA-D-MANNOPYRANOSE
lig 9
MAN
D
5 11ALPHA-D-MANNOPYRANOSE
lig 10
NAG
A
1210 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
IOD
A
1 1IODIDE ION
lig 12
IOD
A
2 1IODIDE ION
lig 13
IOD
A
3 1IODIDE ION
lig 14
IOD
A
4 1IODIDE ION
lig 15
IOD
A
5 1IODIDE ION
lig 16
IOD
A
6 1IODIDE ION
lig 17
IOD
A
7 1IODIDE ION
lig 18
IOD
A
8 1IODIDE ION
lig 19
IOD
A
9 1IODIDE ION
lig 20
IOD
A
10 1IODIDE ION
lig 21
IOD
A
11 1IODIDE ION
lig 22
IOD
A
12 1IODIDE ION
lig 23
IOD
A
13 1IODIDE ION
lig 24
IOD
A
14 1IODIDE ION
lig 25
IOD
A
15 1IODIDE ION
lig 26
IOD
A
16 1IODIDE ION
lig 27
IOD
A
17 1IODIDE ION
lig 28
IOD
A
18 1IODIDE ION
lig 29
IOD
A
19 1IODIDE ION