Analysis of Ligand-Protein Contacts in PDB entry:
3D12


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 52 ligands in PDB entry 3D12. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
BMA
C
3 11BETA-D-MANNOPYRANOSE
lig 4
BMA
C
4 11BETA-D-MANNOPYRANOSE
lig 5
MAN
C
5 11ALPHA-D-MANNOPYRANOSE
lig 6
LXZ
F
1 142-ACETAMIDO-2-DEOXY-ALPHA-D-IDOPYRANOSE
lig 7
NGA
F
2 142-ACETAMIDO-2-DEOXY-BETA-D-GALACTOPYRANOSE
lig 8
GL0
F
3 11BETA-D-GULOPYRANOSE
lig 9
BGC
F
4 11BETA-D-GLUCOPYRANOSE
lig 10
GLC
F
5 11ALPHA-D-GLUCOPYRANOSE
lig 11
BGC
F
6 11BETA-D-GLUCOPYRANOSE
lig 12
GLC
F
7 11ALPHA-D-GLUCOPYRANOSE
lig 13
NAG
G
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 14
NAG
G
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 15
NAG
H
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 16
NAG
H
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 17
BMA
H
3 11BETA-D-MANNOPYRANOSE
lig 18
BGC
H
4 11BETA-D-GLUCOPYRANOSE
lig 19
MAN
H
5 11ALPHA-D-MANNOPYRANOSE
lig 20
LXB
I
1 142-ACETAMIDO-2-DEOXY-BETA-D-GULOPYRANOSE
lig 21
NGZ
I
2 142-ACETAMIDO-2-DEOXY-ALPHA-L-GLUCOPYRANOSE
lig 22
GL0
I
3 11BETA-D-GULOPYRANOSE
lig 23
BGC
I
4 11BETA-D-GLUCOPYRANOSE
lig 24
GLC
I
5 11ALPHA-D-GLUCOPYRANOSE
lig 25
BGC
I
6 11BETA-D-GLUCOPYRANOSE
lig 26
GXL
I
7 11ALPHA-L-GALACTOPYRANOSE
lig 27
NAG
J
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 28
NAG
J
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 29
NAG
A
1210 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 30
SO4
A
1368 5SULFATE ION
lig 31
SO4
A
1369 5SULFATE ION
lig 32
SO4
A
1370 5SULFATE ION
lig 33
SO4
A
1371 5SULFATE ION
lig 34
SO4
A
1372 5SULFATE ION
lig 35
SO4
A
1373 5SULFATE ION
lig 36
SO4
A
1374 5SULFATE ION
lig 37
SO4
A
1375 5SULFATE ION
lig 38
SO4
A
1376 5SULFATE ION
lig 39
SO4
B
202 5SULFATE ION
lig 40
SO4
B
203 5SULFATE ION
lig 41
NAG
D
1310 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 42
SO4
D
1468 5SULFATE ION
lig 43
SO4
D
1469 5SULFATE ION
lig 44
SO4
D
1470 5SULFATE ION
lig 45
SO4
D
1471 5SULFATE ION
lig 46
SO4
D
1472 5SULFATE ION
lig 47
SO4
D
1473 5SULFATE ION
lig 48
SO4
D
1474 5SULFATE ION
lig 49
SO4
D
1475 5SULFATE ION
lig 50
SO4
D
1476 5SULFATE ION
lig 51
SO4
D
1477 5SULFATE ION
lig 52
SO4
E
190 5SULFATE ION