Analysis of Ligand-Protein Contacts in PDB entry:
3D9P


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

Note, this PDB entry contains modified residue(s) PHOSPHOSERINE (SEP) . This residue is treated as heterogroup (ligand) both in the PDB entry and by LPC/CSU analysis.


There are 13 ligands in PDB entry 3D9P. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
SEP
Y
2 10PHOSPHOSERINE
lig 2
SEP
Z
2 10PHOSPHOSERINE
lig 3
SEP
Z
5 10PHOSPHOSERINE
lig 4
SO4
A
146 5SULFATE ION
lig 5
SO4
A
147 5SULFATE ION
lig 6
SO4
A
148 5SULFATE ION
lig 7
SO4
A
149 5SULFATE ION
lig 8
SO4
A
150 5SULFATE ION
lig 9
SO4
A
151 5SULFATE ION
lig 10
SO4
B
146 5SULFATE ION
lig 11
SO4
B
147 5SULFATE ION
lig 12
SO4
B
148 5SULFATE ION
lig 13
SO4
B
149 5SULFATE ION