Analysis of Ligand-Protein Contacts in PDB entry:
3FYI


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 43 ligands in PDB entry 3FYI. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
HEA
A
567 60HEME-A
lig 2
HEA
A
568 60HEME-A
lig 3
CU1
A
569 1COPPER (I) ION
lig 4
MG
A
570 1MAGNESIUM ION
lig 5
CA
A
571 1CALCIUM ION
lig 6
CYN
A
572 2CYANIDE ION
lig 7
DMU
A
573 33DECYL-BETA-D-MALTOPYRANOSIDE
lig 8
DMU
A
574 33DECYL-BETA-D-MALTOPYRANOSIDE
lig 9
DMU
A
575 22DECYL-BETA-D-MALTOPYRANOSIDE
lig 10
DMU
A
576 33DECYL-BETA-D-MALTOPYRANOSIDE
lig 11
TRD
A
577 13TRIDECANE
lig 12
TRD
A
578 13TRIDECANE
lig 13
TRD
A
579 7TRIDECANE
lig 14
TRD
A
580 7TRIDECANE
lig 15
TRD
A
581 13TRIDECANE
lig 16
TRD
A
582 13TRIDECANE
lig 17
HTO
B
1 10HEPTANE-1,2,3-TRIOL
lig 18
CU1
B
3 1COPPER (I) ION
lig 19
CU1
B
4 1COPPER (I) ION
lig 20
CD
B
8 1CADMIUM ION
lig 21
CD
B
9 1CADMIUM ION
lig 22
DMU
B
288 33DECYL-BETA-D-MALTOPYRANOSIDE
lig 23
DMU
B
11 23DECYL-BETA-D-MALTOPYRANOSIDE
lig 24
HEA
C
567 60HEME-A
lig 25
HEA
C
568 60HEME-A
lig 26
CU1
C
569 1COPPER (I) ION
lig 27
MG
C
570 1MAGNESIUM ION
lig 28
CA
C
571 1CALCIUM ION
lig 29
CYN
C
572 2CYANIDE ION
lig 30
TRD
C
1001 13TRIDECANE
lig 31
DMU
C
1002 23DECYL-BETA-D-MALTOPYRANOSIDE
lig 32
DMU
C
1005 33DECYL-BETA-D-MALTOPYRANOSIDE
lig 33
TRD
C
1006 13TRIDECANE
lig 34
TRD
C
1009 7TRIDECANE
lig 35
TRD
C
1010 9TRIDECANE
lig 36
CU1
D
3 1COPPER (I) ION
lig 37
CU1
D
4 1COPPER (I) ION
lig 38
CD
D
8 1CADMIUM ION
lig 39
CD
D
9 1CADMIUM ION
lig 40
DMU
D
1003 33DECYL-BETA-D-MALTOPYRANOSIDE
lig 41
TRD
D
1007 13TRIDECANE
lig 42
TRD
D
1008 7TRIDECANE
lig 43
DMU
D
1011 23DECYL-BETA-D-MALTOPYRANOSIDE