Analysis of Ligand-Protein Contacts in PDB entry:
3IYW


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 11 ligands in PDB entry 3IYW. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
PCA
H
1 8PYROGLUTAMIC ACID
lig 2
PCA
K
1 8PYROGLUTAMIC ACID
lig 3
NDG
D
1 142-ACETAMIDO-2-DEOXY-ALPHA-D-GLUCOPYRANOSE
lig 4
NDG
D
2 142-ACETAMIDO-2-DEOXY-ALPHA-D-GLUCOPYRANOSE
lig 5
FUL
D
3 10BETA-L-FUCOPYRANOSE
lig 6
NDG
E
1 142-ACETAMIDO-2-DEOXY-ALPHA-D-GLUCOPYRANOSE
lig 7
NDG
E
2 142-ACETAMIDO-2-DEOXY-ALPHA-D-GLUCOPYRANOSE
lig 8
FUL
E
3 10BETA-L-FUCOPYRANOSE
lig 9
NDG
F
1 142-ACETAMIDO-2-DEOXY-ALPHA-D-GLUCOPYRANOSE
lig 10
NDG
F
2 142-ACETAMIDO-2-DEOXY-ALPHA-D-GLUCOPYRANOSE
lig 11
FUL
F
3 10BETA-L-FUCOPYRANOSE