Analysis of Ligand-Protein Contacts in PDB entry:
3N8W


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 24 ligands in PDB entry 3N8W. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NDG
C
2 142-ACETAMIDO-2-DEOXY-ALPHA-D-GLUCOPYRANOSE
lig 3
NAG
D
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
NAG
D
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
BMA
D
3 11BETA-D-MANNOPYRANOSE
lig 6
NAG
E
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 7
NDG
E
2 142-ACETAMIDO-2-DEOXY-ALPHA-D-GLUCOPYRANOSE
lig 8
BMA
E
3 11BETA-D-MANNOPYRANOSE
lig 9
MAN
E
4 11ALPHA-D-MANNOPYRANOSE
lig 10
MAN
E
5 11ALPHA-D-MANNOPYRANOSE
lig 11
NAG
F
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 12
NDG
F
2 142-ACETAMIDO-2-DEOXY-ALPHA-D-GLUCOPYRANOSE
lig 13
NAG
G
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 14
NAG
G
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 15
MAN
G
3 11ALPHA-D-MANNOPYRANOSE
lig 16
NAG
H
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 17
NDG
H
2 142-ACETAMIDO-2-DEOXY-ALPHA-D-GLUCOPYRANOSE
lig 18
BMA
H
3 11BETA-D-MANNOPYRANOSE
lig 19
HEM
A
801 43PROTOPORPHYRIN IX CONTAINING FE
lig 20
FLP
A
701 18FLURBIPROFEN
lig 21
BOG
A
751 20OCTYL BETA-D-GLUCOPYRANOSIDE
lig 22
HEM
B
601 43PROTOPORPHYRIN IX CONTAINING FE
lig 23
BOG
B
1750 13OCTYL BETA-D-GLUCOPYRANOSIDE
lig 24
BOG
B
1751 12OCTYL BETA-D-GLUCOPYRANOSIDE