Analysis of Ligand-Protein Contacts in PDB entry:
3NDH


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 13 ligands in PDB entry 3NDH. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
NA
A
217 1SODIUM ION
lig 2
CL
A
218 1CHLORIDE ION
lig 3
PGE
A
219 10TRIETHYLENE GLYCOL
lig 4
ACT
A
220 4ACETATE ION
lig 5
SO4
A
221 5SULFATE ION
lig 6
SO4
A
222 5SULFATE ION
lig 7
NA
B
217 1SODIUM ION
lig 8
CL
B
218 1CHLORIDE ION
lig 9
PGE
B
219 7TRIETHYLENE GLYCOL
lig 10
PGE
B
220 10TRIETHYLENE GLYCOL
lig 11
ACT
B
221 4ACETATE ION
lig 12
ACT
C
12 4ACETATE ION
lig 13
ACT
C
13 4ACETATE ION