Analysis of Ligand-Protein Contacts in PDB entry:
3P5G


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 12 ligands in PDB entry 3P5G. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
GAL
E
1 12BETA-D-GALACTOPYRANOSE
lig 2
FUC
E
2 10ALPHA-L-FUCOPYRANOSE
lig 3
GLA
E
3 11ALPHA-D-GALACTOPYRANOSE
lig 4
GLA
F
1 12ALPHA-D-GALACTOPYRANOSE
lig 5
FUC
F
2 10ALPHA-L-FUCOPYRANOSE
lig 6
GLA
F
3 11ALPHA-D-GALACTOPYRANOSE
lig 7
CA
A
500 1CALCIUM ION
lig 8
CA
B
500 1CALCIUM ION
lig 9
FUC
C
402 11ALPHA-L-FUCOPYRANOSE
lig 10
CA
C
500 1CALCIUM ION
lig 11
FUC
D
402 11ALPHA-L-FUCOPYRANOSE
lig 12
CA
D
500 1CALCIUM ION