Analysis of Ligand-Protein Contacts in PDB entry:
3PDB


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 17 ligands in PDB entry 3PDB. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
LLP
A
279 24 YL]METHYLIDENEAMINO]HEXANOIC ACID
lig 2
LLP
C
279 24 YL]METHYLIDENEAMINO]HEXANOIC ACID
lig 3
BME
A
1 4BETA-MERCAPTOETHANOL
lig 4
GOL
A
431 6GLYCEROL
lig 5
GOL
A
432 6GLYCEROL
lig 6
OAA
B
1 9OXALOACETATE ION
lig 7
BME
B
431 4BETA-MERCAPTOETHANOL
lig 8
PMP
B
432 164'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE
lig 9
BME
B
433 4BETA-MERCAPTOETHANOL
lig 10
BME
C
1 4BETA-MERCAPTOETHANOL
lig 11
BME
C
431 4BETA-MERCAPTOETHANOL
lig 12
GOL
C
432 6GLYCEROL
lig 13
BME
D
1 4BETA-MERCAPTOETHANOL
lig 14
BME
D
431 4BETA-MERCAPTOETHANOL
lig 15
PMP
D
432 164'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE
lig 16
GOL
D
433 6GLYCEROL
lig 17
GOL
D
434 6GLYCEROL