Analysis of Ligand-Protein Contacts in PDB entry:
3V62


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 20 ligands in PDB entry 3V62. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
MLY
A
27 11N-DIMETHYL-LYSINE
lig 2
MLY
A
38 11N-DIMETHYL-LYSINE
lig 3
MLY
A
40 11N-DIMETHYL-LYSINE
lig 4
MLY
A
41 11N-DIMETHYL-LYSINE
lig 5
MLY
A
54 11N-DIMETHYL-LYSINE
lig 6
MLY
A
58 11N-DIMETHYL-LYSINE
lig 7
MLY
D
27 11N-DIMETHYL-LYSINE
lig 8
MLY
D
38 11N-DIMETHYL-LYSINE
lig 9
MLY
D
40 11N-DIMETHYL-LYSINE
lig 10
MLY
D
41 11N-DIMETHYL-LYSINE
lig 11
MLY
D
54 11N-DIMETHYL-LYSINE
lig 12
MLY
D
58 11N-DIMETHYL-LYSINE
lig 13
NEQ
B
301 9N-ETHYLMALEIMIDE
lig 14
NEQ
B
302 9N-ETHYLMALEIMIDE
lig 15
SO4
B
303 5SULFATE ION
lig 16
SO4
B
304 5SULFATE ION
lig 17
NEQ
E
301 9N-ETHYLMALEIMIDE
lig 18
NEQ
E
302 9N-ETHYLMALEIMIDE
lig 19
SO4
E
303 5SULFATE ION
lig 20
SO4
E
304 5SULFATE ION