Analysis of Ligand-Protein Contacts in PDB entry:
469D


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 25 ligands in PDB entry 469D. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
C43
A
1 212'-O-METHYOXYETHYL-CYTIDINE-5'-MONOPHOSPHA
lig 2
G48
A
2 272'-O-METHYOXYETHYL-GUANOSINE-5'-MONOPHOSPH
lig 3
C43
A
3 242'-O-METHYOXYETHYL-CYTIDINE-5'-MONOPHOSPHA
lig 4
G48
A
4 272'-O-METHYOXYETHYL-GUANOSINE-5'-MONOPHOSPH
lig 5
A44
A
5 262'-O-METHYOXYETHYL-ADENOSINE 5'-MONOPHOSPH
lig 6
A44
A
6 262'-O-METHYOXYETHYL-ADENOSINE 5'-MONOPHOSPH
lig 7
U36
A
7 242'-O-METHYOXYETHYL-URIDINE-5'-MONOPHOSPHAT
lig 8
U36
A
8 242'-O-METHYOXYETHYL-URIDINE-5'-MONOPHOSPHAT
lig 9
C43
A
9 242'-O-METHYOXYETHYL-CYTIDINE-5'-MONOPHOSPHA
lig 10
G48
A
10 272'-O-METHYOXYETHYL-GUANOSINE-5'-MONOPHOSPH
lig 11
C43
A
11 242'-O-METHYOXYETHYL-CYTIDINE-5'-MONOPHOSPHA
lig 12
G48
A
12 272'-O-METHYOXYETHYL-GUANOSINE-5'-MONOPHOSPH
lig 13
C43
B
13 212'-O-METHYOXYETHYL-CYTIDINE-5'-MONOPHOSPHA
lig 14
G48
B
14 272'-O-METHYOXYETHYL-GUANOSINE-5'-MONOPHOSPH
lig 15
C43
B
15 242'-O-METHYOXYETHYL-CYTIDINE-5'-MONOPHOSPHA
lig 16
G48
B
16 272'-O-METHYOXYETHYL-GUANOSINE-5'-MONOPHOSPH
lig 17
A44
B
17 262'-O-METHYOXYETHYL-ADENOSINE 5'-MONOPHOSPH
lig 18
A44
B
18 262'-O-METHYOXYETHYL-ADENOSINE 5'-MONOPHOSPH
lig 19
U36
B
19 242'-O-METHYOXYETHYL-URIDINE-5'-MONOPHOSPHAT
lig 20
U36
B
20 242'-O-METHYOXYETHYL-URIDINE-5'-MONOPHOSPHAT
lig 21
C43
B
21 242'-O-METHYOXYETHYL-CYTIDINE-5'-MONOPHOSPHA
lig 22
G48
B
22 272'-O-METHYOXYETHYL-GUANOSINE-5'-MONOPHOSPH
lig 23
C43
B
23 242'-O-METHYOXYETHYL-CYTIDINE-5'-MONOPHOSPHA
lig 24
G48
B
24 272'-O-METHYOXYETHYL-GUANOSINE-5'-MONOPHOSPH
lig 25
MG
A
100 1MAGNESIUM ION