Analysis of Ligand-Protein Contacts in PDB entry:
4IBL


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 30 ligands in PDB entry 4IBL. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
CGU
L
6 12GAMMA-CARBOXY-GLUTAMIC ACID
lig 2
CGU
L
7 12GAMMA-CARBOXY-GLUTAMIC ACID
lig 3
CGU
L
14 12GAMMA-CARBOXY-GLUTAMIC ACID
lig 4
CGU
L
16 12GAMMA-CARBOXY-GLUTAMIC ACID
lig 5
CGU
L
19 12GAMMA-CARBOXY-GLUTAMIC ACID
lig 6
CGU
L
20 12GAMMA-CARBOXY-GLUTAMIC ACID
lig 7
CGU
L
25 12GAMMA-CARBOXY-GLUTAMIC ACID
lig 8
CGU
L
26 12GAMMA-CARBOXY-GLUTAMIC ACID
lig 9
CGU
L
29 12GAMMA-CARBOXY-GLUTAMIC ACID
lig 10
CGU
L
35 12GAMMA-CARBOXY-GLUTAMIC ACID
lig 11
BGC
L
201 11BETA-D-GLUCOPYRANOSE
lig 12
FUC
L
202 10ALPHA-L-FUCOPYRANOSE
lig 13
MG
L
203 1MAGNESIUM ION
lig 14
CA
L
204 1CALCIUM ION
lig 15
RB
L
205 1RUBIDIUM ION
lig 16
MG
L
206 1MAGNESIUM ION
lig 17
RB
L
207 1RUBIDIUM ION
lig 18
CA
L
208 1CALCIUM ION
lig 19
MG
L
209 1MAGNESIUM ION
lig 20
CA
L
210 1CALCIUM ION
lig 21
RB
L
211 1RUBIDIUM ION
lig 22
RB
L
212 1RUBIDIUM ION
lig 23
BEN
H
301 9BENZAMIDINE
lig 24
CA
H
302 1CALCIUM ION
lig 25
CL
H
303 1CHLORIDE ION
lig 26
RB
H
304 1RUBIDIUM ION
lig 27
RB
H
305 1RUBIDIUM ION
lig 28
CL
H
306 1CHLORIDE ION
lig 29
CL
H
307 1CHLORIDE ION
lig 30
CL
T
301 1CHLORIDE ION