Analysis of Ligand-Protein Contacts in PDB entry:
4BAG


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

Note, this PDB entry contains modified residue(s) PHOSPHOSERINE (SEP) . This residue is treated as heterogroup (ligand) both in the PDB entry and by LPC/CSU analysis.


There are 11 ligands in PDB entry 4BAG. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
SEP
A
954 10PHOSPHOSERINE
lig 2
SEP
B
954 10PHOSPHOSERINE
lig 3
CD
A
2086 1CADMIUM ION
lig 4
CD
A
2087 1CADMIUM ION
lig 5
CD
A
2088 1CADMIUM ION
lig 6
CD
A
2089 1CADMIUM ION
lig 7
GOL
A
2090 6GLYCEROL
lig 8
CD
B
2086 1CADMIUM ION
lig 9
CD
B
2087 1CADMIUM ION
lig 10
CD
B
2088 1CADMIUM ION
lig 11
CD
B
2089 1CADMIUM ION