Analysis of Ligand-Protein Contacts in PDB entry:
4NZD


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 38 ligands in PDB entry 4NZD. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
D
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
D
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
BMA
D
3 11BETA-D-MANNOPYRANOSE
lig 4
MAN
D
4 11ALPHA-D-MANNOPYRANOSE
lig 5
FUC
D
5 10ALPHA-L-FUCOPYRANOSE
lig 6
NAG
E
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 7
NAG
E
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
BMA
E
3 11BETA-D-MANNOPYRANOSE
lig 9
MAN
E
4 11ALPHA-D-MANNOPYRANOSE
lig 10
FUC
E
5 10ALPHA-L-FUCOPYRANOSE
lig 11
NAG
F
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 12
NAG
F
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 13
BMA
F
3 11BETA-D-MANNOPYRANOSE
lig 14
MAN
F
4 11ALPHA-D-MANNOPYRANOSE
lig 15
FUC
F
5 10ALPHA-L-FUCOPYRANOSE
lig 16
MAN
A
301 11ALPHA-D-MANNOPYRANOSE
lig 17
NA
A
307 1SODIUM ION
lig 18
NA
A
308 1SODIUM ION
lig 19
NA
A
309 1SODIUM ION
lig 20
CL
A
310 1CHLORIDE ION
lig 21
CL
A
311 1CHLORIDE ION
lig 22
CL
A
312 1CHLORIDE ION
lig 23
CL
A
313 1CHLORIDE ION
lig 24
TLA
A
314 10L(+)-TARTARIC ACID
lig 25
TLA
A
315 10L(+)-TARTARIC ACID
lig 26
MAN
B
301 11ALPHA-D-MANNOPYRANOSE
lig 27
CL
B
307 1CHLORIDE ION
lig 28
CL
B
308 1CHLORIDE ION
lig 29
CL
B
309 1CHLORIDE ION
lig 30
CL
B
310 1CHLORIDE ION
lig 31
CL
B
311 1CHLORIDE ION
lig 32
TLA
B
312 10L(+)-TARTARIC ACID
lig 33
MAN
C
301 11ALPHA-D-MANNOPYRANOSE
lig 34
NA
C
307 1SODIUM ION
lig 35
NA
C
308 1SODIUM ION
lig 36
CL
C
309 1CHLORIDE ION
lig 37
CL
C
310 1CHLORIDE ION
lig 38
EDO
C
311 41,2-ETHANEDIOL