Analysis of Ligand-Protein Contacts in PDB entry:
4YMJ


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

Note, this PDB entry contains modified residue(s) PHOSPHOSERINE (SEP) . This residue is treated as heterogroup (ligand) both in the PDB entry and by LPC/CSU analysis.


There are 11 ligands in PDB entry 4YMJ. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
SEP
A
706 10PHOSPHOSERINE
lig 2
SEP
B
706 10PHOSPHOSERINE
lig 3
4EJ
A
901 25 YL]BENZONITRILE
lig 4
GOL
A
902 6GLYCEROL
lig 5
GOL
A
903 6GLYCEROL
lig 6
GOL
A
904 6GLYCEROL
lig 7
CL
A
905 1CHLORIDE ION
lig 8
4EJ
B
901 25 YL]BENZONITRILE
lig 9
GOL
B
902 6GLYCEROL
lig 10
GOL
B
903 6GLYCEROL
lig 11
GOL
B
904 6GLYCEROL