Analysis of Ligand-Protein Contacts in PDB entry:
5AP4


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

Note, this PDB entry contains modified residue(s) PHOSPHOTHREONINE (TPO) . This residue is treated as heterogroup (ligand) both in the PDB entry and by LPC/CSU analysis.


There are 6 ligands in PDB entry 5AP4. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
TPO
A
686 11PHOSPHOTHREONINE
lig 2
O38
A
1795 32 PYRIDINE-3-CARBONITRILE
lig 3
7PE
A
1796 13 ETHOXY)ETHOXY)ETHANOL
lig 4
7PE
A
1797 13 ETHOXY)ETHOXY)ETHANOL
lig 5
EDO
A
1798 41,2-ETHANEDIOL
lig 6
EDO
A
1799 41,2-ETHANEDIOL