Analysis of Ligand-Protein Contacts in PDB entry:
5KD1


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 11 ligands in PDB entry 5KD1. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
HEM
A
201 43PROTOPORPHYRIN IX CONTAINING FE
lig 2
SO4
A
202 5SULFATE ION
lig 3
SO4
A
203 5SULFATE ION
lig 4
SO4
A
204 5SULFATE ION
lig 5
SO4
A
205 5SULFATE ION
lig 6
3QM
A
206 11[(2R)-2-NITROSOPROPYL]BENZENE
lig 7
GOL
A
207 6GLYCEROL
lig 8
GOL
A
208 6GLYCEROL
lig 9
GOL
A
209 6GLYCEROL
lig 10
GOL
A
210 6GLYCEROL
lig 11
GOL
A
211 6GLYCEROL