Analysis of Ligand-Protein Contacts in PDB entry:
5KX8


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

Note, this PDB entry contains modified residue(s) PHOSPHOSERINE (SEP) . This residue is treated as heterogroup (ligand) both in the PDB entry and by LPC/CSU analysis.


There are 16 ligands in PDB entry 5KX8. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
TPO
A
342 11PHOSPHOTHREONINE
lig 2
TPO
A
345 11PHOSPHOTHREONINE
lig 3
SEP
A
346 10PHOSPHOSERINE
lig 4
TPO
B
342 11PHOSPHOTHREONINE
lig 5
TPO
B
345 11PHOSPHOTHREONINE
lig 6
SEP
B
346 10PHOSPHOSERINE
lig 7
TPO
C
342 11PHOSPHOTHREONINE
lig 8
TPO
C
345 11PHOSPHOTHREONINE
lig 9
SEP
C
346 10PHOSPHOSERINE
lig 10
TPO
D
342 11PHOSPHOTHREONINE
lig 11
TPO
D
345 11PHOSPHOTHREONINE
lig 12
SEP
D
346 10PHOSPHOSERINE
lig 13
6YE
A
501 27 PIPERAZIN-1-YL-PYRAZOLO[1,5-A]PYRIMIDINE-
lig 14
6YE
B
501 27 PIPERAZIN-1-YL-PYRAZOLO[1,5-A]PYRIMIDINE-
lig 15
6YE
C
501 27 PIPERAZIN-1-YL-PYRAZOLO[1,5-A]PYRIMIDINE-
lig 16
6YE
D
501 27 PIPERAZIN-1-YL-PYRAZOLO[1,5-A]PYRIMIDINE-