Analysis of Ligand-Protein Contacts in PDB entry:
5PTI


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 65 ligands in PDB entry 5PTI. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
PO4
A
70 5PHOSPHATE ION
lig 2
UNX
A
324 1UNKNOWN ATOM OR ION
lig 3
DOD
A
80 1
lig 4
DOD
A
101 1
lig 5
DOD
A
102 1
lig 6
DOD
A
105 1
lig 7
DOD
A
110 1
lig 8
DOD
A
111 1
lig 9
DOD
A
112 1
lig 10
DOD
A
113 1
lig 11
DOD
A
116 1
lig 12
DOD
A
117 1
lig 13
DOD
A
119 1
lig 14
DOD
A
121 1
lig 15
DOD
A
122 1
lig 16
DOD
A
125 1
lig 17
DOD
A
126 1
lig 18
DOD
A
127 1
lig 19
DOD
A
129 1
lig 20
DOD
A
133 1
lig 21
DOD
A
134 1
lig 22
DOD
A
138 1
lig 23
DOD
A
140 1
lig 24
DOD
A
143 1
lig 25
DOD
A
144 1
lig 26
DOD
A
145 1
lig 27
DOD
A
146 1
lig 28
DOD
A
156 1
lig 29
DOD
A
157 1
lig 30
DOD
A
158 1
lig 31
DOD
A
159 1
lig 32
DOD
A
160 1
lig 33
DOD
A
200 1
lig 34
DOD
A
201 1
lig 35
DOD
A
202 1
lig 36
DOD
A
203 1
lig 37
DOD
A
204 1
lig 38
DOD
A
205 1
lig 39
DOD
A
209 1
lig 40
DOD
A
210 1
lig 41
DOD
A
211 1
lig 42
DOD
A
212 1
lig 43
DOD
A
214 1
lig 44
DOD
A
216 1
lig 45
DOD
A
217 1
lig 46
DOD
A
218 1
lig 47
DOD
A
219 1
lig 48
DOD
A
220 1
lig 49
DOD
A
223 1
lig 50
DOD
A
225 1
lig 51
DOD
A
302 1
lig 52
DOD
A
304 1
lig 53
DOD
A
310 1
lig 54
DOD
A
311 1
lig 55
DOD
A
312 1
lig 56
DOD
A
313 1
lig 57
DOD
A
314 1
lig 58
DOD
A
315 1
lig 59
DOD
A
316 1
lig 60
DOD
A
317 1
lig 61
DOD
A
318 1
lig 62
DOD
A
319 1
lig 63
DOD
A
320 1
lig 64
DOD
A
321 1
lig 65
DOD
A
322 1