Analysis of Ligand-Protein Contacts in PDB entry:
6CGD


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 14 ligands in PDB entry 6CGD. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
GNP
A
500 32PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTE
lig 2
AKN
A
600 40 OXIDANYL-CYCLOHEXYL]-4-AZANYL-2-OXIDANYL-
lig 3
MG
A
700 1MAGNESIUM ION
lig 4
MG
A
702 1MAGNESIUM ION
lig 5
CL
A
802 1CHLORIDE ION
lig 6
GNP
B
500 32PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTE
lig 7
MG
B
700 1MAGNESIUM ION
lig 8
MG
B
702 1MAGNESIUM ION
lig 9
CL
B
802 1CHLORIDE ION
lig 10
GNP
C
500 32PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTE
lig 11
MG
C
700 1MAGNESIUM ION
lig 12
MG
C
702 1MAGNESIUM ION
lig 13
CL
C
802 1CHLORIDE ION
lig 14
GNP
D
500 21PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTE